Taxonomic studies of Pterostichus ishikawai Nemoto (Coleoptera: Carabidae)

A macrocephalic pterostichine carabid, Pterostichus ishikawai Nemoto, endemic to the Korean Peninsula, is taxonomically revised based mainly on the membranous parts of the genitalia (male endophallus and female vagina). Two species are separated from P. ishikawai (type locality: Mount Taebaegsan) and newly described: P. ishikawaioides (type locality: Mount Sobaeksan) and P. jiricola (type locality: Mount Jirisan). Since comparative male genital morphology does not support monophyly for these three species, the two novel species should be treated as distinct species, not subspecies of P. ishikawai.     

A molecular phylogeny of the tribe Aphidini (Insecta: Hemiptera: Aphididae) based on the mitochondrial tRNA/COII, 12S/16S and the nuclear EF1α genes

Abstract A phylogeny of the tribe Aphidini (Hemiptera: Aphididae) was reconstructed from three gene fragments: two mitochondrial regions, partial tRNA‐leucine + cytochrome oxidase II (tRNA/COII), partial 12S rRNA + tRNA‐valine + 16S rRNA (12S/16S) and one nuclear gene, the elongation factor‐1 alpha (EF1α). Bayesian phylogenetic (BP) analyses were performed on each individual dataset of tRNA/COII, 12S/16S and EF1α, and maximum parsimony (MP), Bremer support test, maximum likelihood (ML) and BP analysis were performed on the combined dataset. After comparing our molecular phylogenetic results with the classic classification based on morphological and ecological data, we analysed three main issues: the monophyletic relationships among tribes and subtribes, the validities of the latest taxonomic positions of genera and species and the status of certain Aphis species groups. Our results indicate that 36 of the species analysed, with the exception of Cryptosiphum artemisiae, are clustered within the clade of Aphidini. Also, the 28 species representative of the subtribe Aphidina were separated from the eight species representative of Rhopalosiphina; each monophyletic subtribe was supported by significant P‐values in the combined analysis. According to our results, Cryptosiphum should be moved to Macrosiphini because it is more closely related to the genera Lipaphis and Brevicoryne. The genus Toxoptera was recovered as non‐monophyletic. In Rhopalosiphina, three genera, Hyalopterus, Rhopalosiphum and Schizaphis, were relatively closer to each other than to the genus Melanaphis. In the relationships between species‐groups among Aphis, most species were separated into two main lineages; the fabae group seemed to be more closely related to the spiraecola and craccivora group rather than to the gossypii group.     

Seasonal distribution and species composition of daytime biting mosquitoes

Adults and immatures of Aedes mosquito populations were collected at temperatures between 40 and 44°C (summer), while larvae were collected at 0°C (winter). Major mosquito activities were observed from February to mid-December at various collection sites that yielded high populations of Aedes spp. from May to September, and high populations of Culex spp. and Anopheles spp. from March to September. In June to July, mosquito activity was suspended because the relative humidity was high (70%); a result of the monsoon rains. In August, with temperature ranging from 38 to 42°C, the populations of Culex , Anopheles and Aedes began to increase (36.8, 32.1 and 26.3%, respectively). Population estimates (through standard prototype Centers for Disease Control (CDC) and Biogents (BG)-sentinel) and species composition of Aedes in forest habitats indicated a rapid increase in the populations of Ae. albopictus (52.3%), Ae. aegypti (19.1%) and Ae. vittatus (28.5%) following the rainy season in July. Areas positive for Ae. albopictus had identical population levels and distribution ranges of Ae. vittatus , however, there were no Ae. aegypti in Ae. albopictus areas from August to September. The population level, seasonal distribution, habitat and areas of adult activity marked by global positioning system (GPS) coordinates are being used for reference and for species composition data of Anopheles spp. (2), Culex spp. (10) and Aedes spp. (5) in addition to associated temperature, relative humidity and physico-chemical factors of larval habitat. Global meteorological changes have caused an expansion of the active period, leading to the mosquito's possibility of being a vector of disease increasing, resulting in the spread of dengue fever.     

Molecular cloning and expression pattern of 14-3-3ζ from the malaria vector, Anopheles sinensis

14-3-3 proteins are known to play a pivotal role in cell survival, apoptosis and signal transduction. The 14-3-3ζ isoform has been cloned and characterized from many eukaryotic organisms, including the fruit fly and silkworm. However, no study on mosquito 14-3-3 has been reported to date. In an attempt to investigate the function of 14-3-3 in midgut epithelial cells undergoing apoptosis, a cDNA library was generated from the malaria vector, Anopheles sinensis , which was treated with apoptosis-inducing Actinomycin-D. We were able to identify and obtain A. sinensis 14-3-3ζ cDNA ( Ansi14-3-3ζ ) from expressed sequence tags (EST) analysis after conducting massive sequencing of the A. sinensis cDNA library. Ansi14-3-3ζ has very high homology to 14-3-3 homologs of various insects, such as Anopheles gambiae (100%), Aedes aegypti (100%), Drosophila melanogaster (96%), Bombyx mori (93%), Apis mellifera (93%) and Mus musculus (81%), indicating that mosquito 14-3-3ζ is a highly conserved gene in diverse organisms. Analysis of temporal expression patterns showed that Ansi14-3-3ζ mRNA is highly expressed in egg, early pupae and adult stages and is also expressed, although at low levels, in fourth instar larvae and late pupae. In response to two immune elicitors (lipopolysaccharide and laminarin), no striking induction of 14-3-3ζ mRNA was observed in A. sinensis . Further studies of the precise biological function, inducibility and subcellular distribution of 14-3-3ζ are required in Plasmodium invasion-induced apoptotic midgut cells in A. sinensis in the context of the Time Bomb model.     

Source–sink dynamics structure a common montane mammal

Assessing the relative role of evolutionary processes on genetic diversity is critical for understanding species response to climatic change. However, many processes, independent of climate, can lead to the same genetic pattern. Because effective population size and gene flow are affected directly by abundance and dispersal, population ecology has the potential to profoundly influence patterns of genetic variation over microevolutionary timescales. Here, we use aDNA data and simulations to explore the influence of population ecology and Holocene climate change on genetic diversity of the Uinta ground squirrel (Spermophilus armatus). We examined phylochronology from three modern and two ancient populations spanning the climate transitions of the last 3000 years. Population genetic analyses based on summary statistics suggest that changes in genetic diversity and structure coincided with the Medieval Warm Period (MWP), c. 1000 years ago. Serial coalescent simulations allowed us to move beyond correlation with climate to statistically compare the likelihoods of alternative population histories given the observed data. The data best fit source–sink models that include large, mid‐elevation populations that exchange many migrants and small populations at the elevational extremes. While the MWP is likely to have reduced genetic diversity, our model‐testing approach revealed that MWP‐driven changes in genetic structure were not better supported for the range of models explored. Our results point to the importance of species ecology in understanding responses to climate, and showcase the use of ancient genetic data and simulation‐based inference for unraveling the relative roles of microevolutionary processes.     

Linking landscape-level change to habitat quality: an evaluation of restoration actions on the freshwater habitat of spring-run Chinook salmon

1. Conservation planning is often hampered by the lack of causal quantitative links between landscape characteristics, restoration actions and habitat conditions that impact the status of imperilled species. Here we present a first step toward linking actions on the landscape to the population status of endangered stream‐type Chinook salmon (Oncorhynchus tshawytscha). 2. We developed relationships between land use, landscape characteristics and freshwater habitat of spring Chinook salmon in the Wenatchee River basin. Available data allowed us to find relationships that described water temperatures at several life stages (prespawning, egg incubation and summer rearing) and substratum characteristics, including fine sediments, cobble and embeddedness. Predictors included altitude, gradient, mean annual precipitation, total and riparian forest cover, road density, impervious surface and alluvium. We used a model averaging approach to account for parameter and model selection uncertainty. Key predictors were total forest cover and impervious surface area for prespawning and summer rearing temperatures; precipitation and stream gradients were important predictors of the percent of fine sediments in stream substrata. 3. We estimated habitat conditions using these relationships in three alternative landscape scenarios: historical, no restoration and one that included a set of restoration actions from local conservation planning. We found that prespawning and summer temperatures were estimated to be slightly higher historically relative to current conditions in dry sparsely forested areas, but lower in some important Chinook salmon spawning and rearing areas and lower in those locations under the restoration scenario. Fine sediments were lower in the historical scenario and were reduced as a consequence of restoration actions in two areas currently unoccupied by Chinook salmon that contain reaches with some potential for high quality spawning and rearing. Cobble and embeddedness in general were predicted to be higher historically and changed little as a result of restoration actions relative to current conditions. 4. This modelling framework converts suites of restoration actions into changes in habitat condition, thereby enabling restoration planners to evaluate alternative combinations of proposed actions. It also provides inputs to models linking habitat conditions to population status. This approach represents a first step in estimating impacts of restoration strategies, and can provide key information for conservation managers and planners.